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6-Mercaptopurine

C5H4N4S, 152.182 g/mol. Its structure, the values that were measured, the values that were calculated, and where each one came from.

verified recordOrganic — aromatic thiol3 measured properties

Drawn from the SMILES. It shows how the atoms are connected — not a photograph of a molecule, and not its shape in space.

Identifiers

Molecular formula
C₅H₄N₄S
Molecular weight
152.182 g/mol
Exact mass
152.015667 g/mol
IUPAC name
7H-purine-6-thiol
SMILES
Sc1ncnc2nc[nH]c12
InChI
InChI=1S/C5H4N4S/c10-5-3-4(7-1-6-3)8-2-9-5/h1-2H,(H2,6,7,8,9,10)
InChIKey
GLVAUDGFNGKCSF-UHFFFAOYSA-N

Both are open without an account.

Measured properties

Values somebody obtained from a sample and published. Where two sources report the same property they are both shown, in the units each used — a disagreement between them is information, and averaging it away would be inventing a number neither one gave.

Melting Point
313 dec °Cmeasured · PhysProp
308 °C (decomposes)measured · Larranaga, M.D., Lewis, R.J. Sr., Lewis, R.A.; Hawley's Condensed Chemical Dictionary 16th Edition. John Wiley & Sons, Inc. Hoboken, NJ 2016., p. 875
313 °Cmeasured · reference compound database
Solubility
68500 mg/Lmeasured · YALKOWSKY,SH & DANNENFELSER,RM (1992)
In water, 6848 mg/L at 30 °Cmeasured · Yalkowsky, S.H., He, Yan, Jain, P. Handbook of Aqueous Solubility Data Second Edition. CRC Press, Boca Raton, FL 2010, p. 139
Insoluble in watermeasured · Haynes, W.M. (ed.). CRC Handbook of Chemistry and Physics. 95th Edition. CRC Press LLC, Boca Raton: FL 2014-2015, p. 3-188
Soluble in boiling water (1 in 100)measured · IARC. Monographs on the Evaluation of the Carcinogenic Risk of Chemicals to Humans. Geneva: World Health Organization, International Agency for Research on Cancer, 1972-PRESENT. (Multivolume work).
Soluble in hot alcohol and dilute alkali solutions; slightly soluble in dilute sulfuric acidmeasured · Larranaga, M.D., Lewis, R.J. Sr., Lewis, R.A.; Hawley's Condensed Chemical Dictionary 16th Edition. John Wiley & Sons, Inc. Hoboken, NJ 2016., p. 875
Soluble in alkaline solutions (with decomposition), hot ethanol and ethanol (1 in 950); slightly soluble in dilute sulphuric acid; almost insoluble in water, acetone, chloroform and diethyl ether.measured · IARC. Monographs on the Evaluation of the Carcinogenic Risk of Chemicals to Humans. Geneva: World Health Organization, International Agency for Research on Cancer, 1972-PRESENT. (Multivolume work).
7.35e-01 g/Lmeasured · reference compound database
22.5 [ug/mL] (The mean of the results at pH 7.4)measured · reference compound database
LogP
0.01measured · HANSCH,C & LEO,AJ (1985)
log Kow = 0.01 at pH 7.4measured · Hansch, C., Leo, A., D. Hoekman. Exploring QSAR - Hydrophobic, Electronic, and Steric Constants. Washington, DC: American Chemical Society., 1995., p. 11
-0.4measured · reference compound database
0.01measured · reference compound database

Calculated properties

Derived from the structure rather than from a sample. These are reproducible and they are not measurements: a calculated partition coefficient and a measured one can differ by a long way, and where both exist they are listed apart on purpose.

Molecular weight
152.18 g/molcalculated · reference compound database
Average mass of one molecule, from reference compound database.
Exact mass
152.01566732 Dacalculated · reference compound database
Mass of the most common isotopic form.
XLogP3
0.7calculated · reference compound database
Estimated oil/water partition, computed by reference compound database.
Polar surface area
55.5 Ųcalculated · reference compound database
Polar surface area as computed by reference compound database.
Complexity
131calculated · reference compound database
A rough measure of how intricate the structure is.
H-bond donors
2calculated · reference compound database
H-bond acceptors
4calculated · reference compound database
logP
0.6416calculated · chemistry engine
Estimated preference for oil over water. Higher means more oil-like.
Topological polar surface area
54.46 Ųcalculated · chemistry engine
Surface area from polar atoms; relates to how easily a molecule crosses membranes.
H-bond donors
2calculated · chemistry engine
Atoms that can donate a hydrogen bond.
H-bond acceptors
4calculated · chemistry engine
Atoms that can accept a hydrogen bond.
Rotatable bonds
0calculated · chemistry engine
Single bonds the molecule can freely twist around.
Molar refractivity
38.9357 cm³/molcalculated · chemistry engine
Relates to the molecule's polarisability.
Fraction sp³ carbons
0calculated · chemistry engine
Share of carbon atoms with tetrahedral bonding.
QED drug-likeness
0.43calculated · chemistry engine
Quantitative estimate of drug-likeness (0–1).

What it is made of

Elements

Percentages are of the molecular weight above, worked out the same way the molar mass calculator does it.

Structure

Heavy atoms, hydrogen excluded
10
Total atoms, hydrogen included
14
Rings
2
Aromatic rings
2
Stereocentres
0
Formal charge
0

Functional groups

  • Thiol

    An –SH group, the sulfur analogue of an alcohol.

  • Aromatic ring

    A flat six-membered ring with delocalised electrons.

  • Aromatic ring (five-membered)

    A flat five-membered ring with delocalised electrons, such as furan, thiophene or pyrrole.

Matched by structural pattern, not by a measurement.

The molecule in three dimensions

Rotate and inspect the atoms. Loaded only when you ask, so the page stays light.

The drawing above is a diagram of what is bonded to what. A molecule is not flat, and the model here is one low-energy shape generated from the connectivity — useful for seeing which groups can reach each other, and not a measured structure. A real sample is a population of conformations, interconverting.

Reactions it appears in

No documented reaction with a written procedure and a source involves 6-Mercaptopurine yet.

Other names for it

The systematic name on this record is 7H-purine-6-thiol.

The sources also call it mercaptopurine, Mercapurin, 6-Thiopurine, 6-Thioxopurine, 9H-Purine-6-thiol, 6-Mercaptopurin, Puri-Nethol, 6-Thiohypoxanthine, 1,9-dihydro-6H-purine-6-thione, Mercaptopurin, 3,7-dihydropurine-6-thione, Hypoxanthine, thio-.

Structurally related

Molecules sharing this formula, or whose fingerprint is at least 40% similar to this one. Similarity is Tanimoto on Morgan fingerprints over this library only — it is a measure of structural overlap, not of how alike they behave.

Where these values came from

compound record.

What this page does not claim

The identifiers are what the source record holds, copied rather than recomputed. Measured values are reported as their source gave them, units and all; calculated values are marked as calculated and are not measurements. Where a field is absent the page says so, because a blank cell reads as a zero and a guessed value reads as a fact.

Nothing here is a hazard assessment, a purity statement or advice about handling a sample. A flash point quoted from a safety database is a number somebody published, not a judgement by us about whether this molecule is safe for what you intend.