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Buchwald–Hartwig amination: 6-Chloronicotinamide → 6-[[2-(Trifluoromethyl)phenyl]methylamino]pyridine-3-carboxamide

1% yield, run at 120 °C, as recorded by experimental reaction archive. The written procedure is below.

verified record, 1% yield recorded, Not balanced as written, From experimental reaction archive

Reagents, catalysts and solvents are in the table below.

The atoms, from reactants to products

NCOCCCCNCCCCCCCCFFFNCCl
Reactants · 1/6
breakingformingbond order changesmapped atom that changes

Drawn from the record's atom map: which bonds break and which form between the reactants and products the source listed. It shows a change in connectivity, not a simulated trajectory and not a mechanism.

What was in the flask

RoleSpeciesFormulaYield
Reactant6-ChloronicotinamideC₆H₅ClN₂O—
Reactant2-(Trifluoromethyl)benzylamineC₈H₈F₃N—
Reagentsodium 2-methylpropan-2-olateC₄H₉NaO—
CatalystBinap, (A+-)-C₄₄H₃₂P₂—
CatalystPalladium (II) acetateC₄H₈O₄Pd—
Solvent1,2-DimethoxyethaneC₄H₁₀O₂—
Product6-[[2-(Trifluoromethyl)phenyl]methylamino]pyridine-3-carboxamideC₁₄H₁₂F₃N₃O1.45%

The equation does not balance as written. That is usual for an experimental record: the source listed what it put in and what it measured, not a stoichiometric equation.

Conditions

Temperature
120 °C

Only the dimensions the source stated are listed. Anything absent here was not recorded, and it is not inferred from what the class usually needs.

Yield

  • 1% of 6-[[2-(Trifluoromethyl)phenyl]methylamino]pyridine-3-carboxamide.

Other recorded runs with the same starting material

No other run in the library makes this product. These runs of the same class start from one of the same reactants, which is the nearest company this record has.

Procedure

Copied from the source record, unedited

To a stirred solution of 6-chloronicotinamide (0.053 g, 0.34 mmol), 2,2'-bis(diphenylphosphino)-1,1'-binaphthyl (0.021 g, 0.03 mmol), sodium 2-methylpropan-2-olate (0.065 g, 0.68 mmol) and diacetoxypalladium (7.60 mg, 0.03 mmol) in DME (1 mL) was added (2-(trifluoromethyl)phenyl)methanamine (0.095 mL, 0.68 mmol). The reaction mixture was subjected to microwave irradiation for 4h at 120 C. Only traces of product was observed. The crude product was dissolved in DMSO (2 mL) and purified using Fractionlynx I, (Xbridge Prep C18 5µm OBD 19x150 mm column), with 5 to 95% acetonitrile in 0.2% ammonia at pH 10. 6-(2-(trifluoromethyl)benzylamino)nicotinamide: 1.45 mg (1.5 %)

The source

This record comes from experimental reaction archive (ord-c7ac817750064edba47d3c6c786a7b69). Open the source and check it against what is on this page.

  • experimental reaction archive record ord-c7ac817750064edba47d3c6c786a7b69 from dataset "750 AstraZeneca ELN dataset" (url: https://chemrxiv.org/engage/chemrxiv/article-details/60c9e3f37792a23bfdb2d471). No atom mapping is provided by the source.

    experimental record · quality medium · source

experimental reaction record.

How to read this record

This is one experiment, not a rule. It says that on one occasion these species were combined under these conditions and this came out. It does not say the reaction will give the same result on your substrate, and nothing on the page has been generalised into a claim that it would.

The pathway is a separate question, kept on separate pages. A mechanism here is the canonical arrow pushing for a class, run on real structures and labelled rule-derived. It is not evidence, and this record is not a mechanism.